You may or may not be familiar with the different box patterns in which you can play scales on your guitar. That's something I get into in a lot more detail in my Guitar Scale Patterns lesson.
To explain these very simply; the boxes you see on the free cheat sheet you downloaded indicate different places where you can play the scale.
In the video below, I demonstrate a connecting pattern that you can use to move in between three different box patterns. This connecting pattern, or run, is super handy because you can start your solo down in the lower registers, then move it up the neck to really build things up. It's easy to play, and sounds really cool.
In the Guitar Scale Patterns lesson I teach this particular run in much more detail than you'll see below, but I wanted to give you an idea of what you can do with the patterns.